Another 20 of the group will be expelled from France although they will face no charges, while 20 will be released, the officials said.
Far-right figure Alexander Shprygin, who heads a Russian football supporters' association, is among the 20 fans who will be thrown out of the country, sources in France and Russia said.
Russian football fans thrown out of France
The three Russians will be tried on the same violence charges as the 10 British, French and Austrian nationals sentenced to prison terms of up to a year on Monday, prosecutor Brice Robin said.
One Frenchman will also face trial on the same charge.
But the Russians will also face charges over a new offence of "knowingly participating in a group" with a view to carrying out "deliberate violence against persons", the prosecutor said.
Russian 'hooligans' trained for 'ultra-violence' in Marseille: prosecutor
That offence carries a one-year prison sentence and a fine of 15,000 euros ($16,900).
The arrest of the Russians turned into a diplomatic incident on Wednesday when Russia summoned France's ambassador in protest.
Russian Foreign Minister Sergei Lavrov described the arrests as "absolutely unacceptable".
COMMENTS
Comments are moderated and generally will be posted if they are on-topic and not abusive.
For more information, please see our Comments FAQ